[Biopython-dev] [Bug 2613] New: test_Wise and test_psw fail under Python 2.3

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2613

           Summary: test_Wise and test_psw fail under Python 2.3
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: minor
          Priority: P5
         Component: Unit Tests
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: bsouthey at gmail.com


Under Python 2.3.7 on Linux x86_64 system, gcc 4.3.2 and numpy 1.1.1, both
test_Wise and test_psw fail. The output is

======================================================================
FAIL: test_Wise                                                       
----------------------------------------------------------------------
Traceback (most recent call last):                                    
  File "run_tests.py", line 152, in runTest                           
    self.runSafeTest()                                                
  File "run_tests.py", line 189, in runSafeTest                       
    expected_handle)                                                  
  File "run_tests.py", line 288, in compare_output                    
    assert expected_line == output_line, \                            
AssertionError:                                                       
Output  : 'doctest of Bio.Wise._build_align_cmdline ... ok\n'         
Expected: 'Doctest: Bio.Wise._build_align_cmdline ... ok\n'           

======================================================================
FAIL: test_psw                                                        
----------------------------------------------------------------------
Traceback (most recent call last):                                    
  File "run_tests.py", line 152, in runTest                           
    self.runSafeTest()                                                
  File "run_tests.py", line 189, in runSafeTest                       
    expected_handle)                                                  
  File "run_tests.py", line 288, in compare_output                    
    assert expected_line == output_line, \                            
AssertionError:                                                       
Output  : 'doctest of Bio.Wise.psw.parse_line ... ok\n'               
Expected: 'Doctest: Bio.Wise.psw.parse_line ... ok\n'                 

----------------------------------------------------------------------


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.