[Biopython-dev] [Bug 2627] New: Updated Bio.MarkovModel to remove oldnumeric and listfns imports

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2627

           Summary: Updated Bio.MarkovModel to remove oldnumeric and listfns
                    imports
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: enhancement
          Priority: P4
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: bsouthey at gmail.com


I have updated Bio.MarkovModel to remove using numpy.oldnumeric and
Bio.listfns.  Hopefully I found the correct places because of the usage of
'from import *'.

The test_MarkovModel.py does pass and the commented section using Baum-Welch
does run without errors. However, this is not my area so it may not be
completely correct. So I would appreciate any other testing.


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