[Biopython-dev] [Bug 2528] NCBIStandalone.blastall(): Replace os.popen3 with subprocess.Popen
bugzilla-daemon at portal.open-bio.org
bugzilla-daemon at portal.open-bio.org
Fri Oct 10 17:07:54 EDT 2008
http://bugzilla.open-bio.org/show_bug.cgi?id=2528
biopython-bugzilla at maubp.freeserve.co.uk changed:
What |Removed |Added
----------------------------------------------------------------------------
Status|NEW |RESOLVED
Resolution| |FIXED
------- Comment #7 from biopython-bugzilla at maubp.freeserve.co.uk 2008-10-10 17:07 EST -------
Note that os.popen3 is deprecated in python 2.6 which gives another reason for
moving to subprocess.
This issue is fixed in Bio/Blast/NCBIStandalone.py revision 1.82, based on
changed discussed on See also Bug 2480.
We use subprocess where present (i.e. python 2.4+) and fall back to os.popen3
(for python 2.3).
--
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.
More information about the Biopython-dev
mailing list