[Biopython-dev] [Bug 2678] Bio.Entrez module does not always retrieve or find DTD files

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2678





------- Comment #3 from lpritc at scri.sari.ac.uk  2008-11-21 03:53 EST -------
(In reply to comment #2)
> Could you make a list of the missing DTDs? You add the missing ones to
> Bio/Entrez/DTDs and reinstall Biopython. It looks like only xhtml1-strict.dtd
> and xhtml-lat1.ent are missing, but after adding these to Bio/Entrez/DTDs you
> may find other missing DTDs.

I'll add the DTDs that I noted above, but the problem is intermittent and I
haven't seen the issue arise again at all, this morning.  If I see anything
else give an error, I'll make a note here.

This may be something to keep in mind if other, similar errors are reported
from future Entrez searches, but if the problem is the result of excessive
server load, or timeouts, it may not be reliably repeatable.


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