[Biopython-dev] [Bug 2670] New: Populate seqfeature.display_name
bugzilla-daemon at portal.open-bio.org
bugzilla-daemon at portal.open-bio.org
Tue Nov 18 11:13:31 UTC 2008
http://bugzilla.open-bio.org/show_bug.cgi?id=2670
Summary: Populate seqfeature.display_name
Product: Biopython
Version: Not Applicable
Platform: All
OS/Version: All
Status: NEW
Severity: enhancement
Priority: P2
Component: BioSQL
AssignedTo: biopython-dev at biopython.org
ReportedBy: biopython-bugzilla at maubp.freeserve.co.uk
The seqfeature table has a display_name text field, currently left blank by
Biopython's loader, but is populated by BioPerl. This field is used in GBrowse
for example: http://gmod.org/wiki/GBrowse
We could use the protein_id, locus_tag, etc depending on what annotation is
available (ideally use the same as BioPerl).
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