[Biopython-dev] [Bug 2225] Do something with the PROJECT line in GenBank files

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2225


chapmanb at 50mail.com changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|REOPENED                    |RESOLVED
         Resolution|                            |FIXED




------- Comment #3 from chapmanb at 50mail.com  2008-11-08 21:56 EST -------
Thanks Peter for the heads up on the future changes. Fixed this with respect to
the offered suggestions with Bio/GenBank/Record.py 1.12; Bio/GenBank/Scanner.py
1.25 and Bio/GenBank/__init__.py 1.95.

I left PROJECT output as shown in our example as it was not clear from the
GenBank documentation whether they would be on multiple or single lines. DBLINK
was output over multiple line as defined in the documentation. When files with
DBLINKs are released we should include a test case.

For feature parsing, both DBLINK and PROJECT will be stored as dbxrefs as
suggested.


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