[Biopython-dev] [Bug 2638] test_PopGen_SimCoal_nodepend.py fails on Windows do to newline issue

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Nov 3 11:22:16 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2638





------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2008-11-03 06:22 EST -------
Created an attachment (id=1030)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=1030&action=view)
Patch to the PopGen/SimCoal/Template.py and the unit test

Looking at the code, rather than using \n to mean a platform aware new line,
\r\n is used (this doesn't always give a CR LF, but on Windows you get CR CR LF
instead).

Also, are the template files in CVS as plain text files or binary files?  I
haven't double checked but I think they may be checked in as binary files with
DOS/Windows new lines...

I haven't committed this as I don't have SIMCOAL installed to check there are
no side effects.


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