[Biopython-dev] [Bug 2680] Bio.AlignAce.Parser.py need to import string

Bartek Wilczynski bartek at rezolwenta.eu.org
Fri Nov 21 10:32:02 EST 2008


Hello,

I fixed the bug (changed both uses of string.atof() to float() ), and
commited to CVS, although I cannot close it in Bugzilla (my
dev.open-bio account does not seem to work for bugzilla).



cheers
Bartek Wilczynski

On Fri, Nov 21, 2008 at 3:57 PM,  <bugzilla-daemon at portal.open-bio.org> wrote:
> http://bugzilla.open-bio.org/show_bug.cgi?id=2680
>
>
>
>
>
> ------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2008-11-21 09:57 EST -------
> This used to work via the "from Bio.ParserSupport import *", as up until
> Biopython 1.48 that imported string.
>
> Fixed in Bio/AlignAce/Parser.py revision 1.4 by importing string (this will be
> included in Biopython 1.49).
>
> I'm leaving this bug open as I would rather not use the string module here at
> all - probably we can just use float() instead of string.atof() but that can
> wait until after Biopython 1.49 is out.
>
>
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-- 
Bartek Wilczynski
==================
Postdoctoral fellow
EMBL, Furlong group
Meyerhoffstrasse 1,
69012 Heidelberg,
Germany
tel: +49 6221 387 8433


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