[Biopython-dev] [Bug 2677] BioSQL seqfeature enhancements

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2677





------- Comment #4 from cymon.cox at gmail.com  2008-11-20 12:14 EST -------
(In reply to comment #3)
> (In reply to comment #0)
> > Ive used the "Sequence Keys" ontology for the location operator and stored
> > loc op in the location_qualifier_value table - not sure this is right...
> >
> 
> I'm not sure off hand either, but would like us to check before committing
> this.  In the short term, what ever BioPerl does is "right" as I'm treating
> that as the BioSQL reference implementation.

I don't read Perl - but I grep'ed through the source and only found one ref to
the location_qualifier_value, and that was in the docs. So maybe they don't
store it there...

Sorry I can be of more help, C.


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