[Biopython-dev] [Bug 2382] Generic Roche or GSFlex "FASTA" parser

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2382





------- Comment #13 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-24 08:10 EST -------
See also http://www.bioperl.org/wiki/Qual_sequence_format where there is a
similar looking file format which they call "qual" described as also being used
by PHRAP and CAP3.  e.g.

>HSMETOO 134bp
10 20 30 40 50 50 50 50 50 20 25 25 30 30 20 15 20 35 50 50 50 50 50 50 
50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 
50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 
50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 
50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 
50 50 50 20 30 20 10 10


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