[Biopython-dev] [Bug 2496] Bio.Blast.NCBIWWW.qblast() does not support RUN_PSIBLAST option

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue May 20 16:31:41 UTC 2008


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
             Status|NEW                         |RESOLVED
         Resolution|                            |INVALID

------- Comment #4 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-20 12:31 EST -------
Follow up discussion on the mailing list:

Katie wrote:
> I asked NCBI about this, and they (eventually) replied that it's "not
> officially supported."  I have been unable to figure out how to get it to
> return iterations after the first one.

I'm going to close this bug as "invalid" unless the NCBI do make a public API
for PSI-BLAST.  It looks like the only solution for now would be to install the
standalone blast tools...

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