[Biopython-dev] [Bug 2475] BioSQL.Loader should reuse existing taxon entries in lineage

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sat May 17 06:13:33 UTC 2008


mdehoon at ims.u-tokyo.ac.jp changed:

           What    |Removed                     |Added
 Attachment #914 is|0                           |1
           obsolete|                            |

------- Comment #32 from mdehoon at ims.u-tokyo.ac.jp  2008-05-17 02:13 EST -------
Created an attachment (id=920)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=920&action=view)
Replacement for "Usage ... to load a SeqRecord's taxonomy"

Recently I made some changes to the Taxonomy parser in Bio.Entrez, specifically
to make it more consistent with the other parsers in Bio.Entrez. Some fields in
the XML are now accessed slightly differently. I updated Loader.py accordingly.

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