[Biopython-dev] [Bug 2496] Bio.Blast.NCBIWWW.qblast() does not support RUN_PSIBLAST option

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu May 8 14:28:21 UTC 2008


------- Comment #2 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-08 10:28 EST -------
This patch seems to be working - note that you will also need to update
Bio/Blast/NCBIXML.py to CVS revision 1.18 in order to parse the results.  This
is due to a small change in the formatting of the version number in the latest
XML output.

I would like someone familiar with PSI-Blast to confirm this is OK before I
commit this change to CVS.

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