[Biopython-dev] [Bug 1999] new frame translation method

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1999





------- Comment #2 from mdehoon at ims.u-tokyo.ac.jp  2008-03-10 06:12 EST -------
Since SeqUtils.frameTranslations and SeqUtils.six_frame_translations are so
similar, I think we should keep only one of these functions. Preferably named
"six_frame_translations", for backward compatibility.
Also, I think we should not require the seqO argument to be a Seq object.
If this function is to replace the existing SeqUtils.six_frame_translations, we
should make to sure to keep all the existing functionality of that function. I
believe current the GC content calculation is missing in
SeqUtils.frameTranslations.


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