[Biopython-dev] [Bug 2408] GenBank records do not contain U's

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Jun 19 10:41:22 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2408


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED




------- Comment #3 from biopython-bugzilla at maubp.freeserve.co.uk  2008-06-19 06:41 EST -------
Given there were no other opinions voiced on how to handle this, I went ahead
and fixed this in Bio/GenBank/__init__.py CVS revision 1.83

For records from RNA, if the sequence contains T but not U, we will use a DNA
alphabet in the Seq object.

Thanks for raising this Marcin.


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