[Biopython-dev] [Bug 2447] EUtils cannot parse PubMed XML for ACS journals

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Jul 7 10:47:48 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2447





------- Comment #3 from mdehoon at ims.u-tokyo.ac.jp  2008-07-07 06:47 EST -------
Using Biopython release 1.47;
Bio.Entrez can parse the XML for this PMID:

>>> from Bio import Entrez
>>> PMID = "17238260"
>>> handle = Entrez.efetch(db='pubmed', id=PMID, retmode='xml')
>>> record = Entrez.read(handle)
>>> 

Noel, can you use Bio.Entrez instead of Bio.EUtils?


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