[Biopython-dev] [Bug 2550] Alphabet problems when adding sequences

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sun Jul 27 14:56:47 EDT 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2550





------- Comment #3 from biopython-bugzilla at maubp.freeserve.co.uk  2008-07-27 14:56 EST -------
Created an attachment (id=978)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=978&action=view)
Patches for test_seq.py and test_GACrossover.py

Adds a new block of tests to test_seq.py to explicitly check a number of
different alphabet combinations.

Also tweaks test_GACrossover.py to define its test alphabet as a subclass of a
suitable generic class in Bio.Alphabet, as otherwise it is not recognised as a
valid alphabet.


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