[Biopython-dev] Dump file in Bio/Saf/__init__.py

[Peter]

On Wed, Jul 16, 2008 at 3:14 PM, Michiel de Hoon <mjldehoon at yahoo.com> wrote:
> I removed a similar piece of code in one more module (I forgot which one).

Bio/MetaTool/__init__.py if anyone wanted to know.  The CVS changes
RSS feed is handy:
http://biopython.org/wiki/Tracking_CVS_commits

> While we're on the subject: the functionality currently in Bio.Saf probably belongs in Bio.AlignIO.

Yes, it probably does - assuming anyone still uses the file format.
I'll take a look at that at some point.

Peter wrote:
>> There is still a similar bit of code in
>> Bio/IntelliGenetics/__init__.py which we could remove, but
>> as the whole module is now deprecated we could just wait
>> for a few releases and then remove it entirely.

I've removed the Bio.IntelliGenetics dumpfile code in CVS.

Peter