[Biopython-dev] [Bug 2375] Coalescent support through Simcoal2

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2375





------- Comment #15 from mdehoon at ims.u-tokyo.ac.jp  2008-01-15 20:33 EST -------
Indeed I was not following this bug.
To me the patch for setup.py looks fine. Feel free to commit it.

The solution in Bio/PopGen/SimCoal/__init__.py to find builtin_tpl_dir is not
so beautiful, but on the other hand I don't see a better way to do it. In
essence, this is an oversight in the Python testing framework. It makes sense
to test from the build directory instead of from the installation directory (we
want to test before we install). Unless I missed something in the
documentation, the current testing framework does not really take that into
account. Anyway, I think the current solution is the best we can do.


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