[Biopython-dev] [Bug 2454] Iterators can't use file-like objects

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Feb 25 20:36:31 UTC 2008


------- Comment #2 from biopython-bugzilla at maubp.freeserve.co.uk  2008-02-25 15:36 EST -------
I agree with you that this is a problem - its something that gets checked
explicitly for the parsers used in Bio.SeqIO by the unit test which uses a
StringIO handle.

Perhaps Bio/File.py would be a good place to put an "is this a handle"
function, or maybe just replace these existing checks with relevant attribute

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