[Biopython-dev] [Bug 2480] Local BLAST fails: Spaces in Windows file-path values

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2480





------- Comment #4 from drpatnaik at yahoo.com  2008-04-04 16:01 EST -------
(In reply to comment #3)

Python throws this error when I do so:

  File "C:\Documents and Settings\patnaik\My
Documents\Python252\lib\site-packages\Bio\Blast\NCBIStandalone.py", line 1650,
in blastall raise ValueError, "blastall does not exist at %s" % blastcmd
ValueError: blastall does not exist at "C:\Documents and Settings\patnaik\My
Documents\blast\bin\blastall.exe"

I get a similar error using:

  my_blast_exe = r'"C:/Documents and Settings/patnaik/My
Documents/blast/bin/blastall.exe"'

blastall.exe _is_ at C:/Documents and Settings/patnaik/My
Documents/blast/bin/blastall.exe


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