[Biopython-dev] [Bug 2489] KDTree NN search without specifying radius

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2489





------- Comment #3 from biopython-bugzilla at maubp.freeserve.co.uk  2008-04-15 10:45 EST -------
The python API would need to be updated to match.  Do you know how to use SWIG?

You mention changes to leaving coordinates as squared distances - this may be
more efficient but would probably break any existing code using this.

As Thomas Hamelryck said on the mailing list, an example to show why this new
code is useful would be very helpful (and to demonstrate the claimed time speed
up).  Link to email thread for anyone not subscribed:

http://lists.open-bio.org/pipermail/biopython-dev/2008-April/003601.html


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