[Biopython-dev] [Bug 2481] bitscore not parsed.

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Fri Apr 4 23:10:58 EDT 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2481





------- Comment #3 from mdehoon at ims.u-tokyo.ac.jp  2008-04-04 23:10 EST -------
Isn't the bit score in the hsps?
Using xbt001.xml from the Biopython test suite, I find

>>> fr.alignments[0].hsps[0].score
469.0
>>> fr.alignments[0].hsps[0].bits 
185.267

Otherwise, which line in xbt001.xml is not being parsed?


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