[Biopython-dev] [Bug 2361] Test Suite Failures from Martel/Sax with egenix mxTextTools 3.0

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Sep 11 22:33:34 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2361





------- Comment #6 from biopython-bugzilla at maubp.freeserve.co.uk  2007-09-11 18:33 EST -------
After applying the updated the patch on bug 2058 to remove the Martel
dependancy from Bio.Fasta, things are a LOT better.

http://bugzilla.open-bio.org/attachment.cgi?id=755

Note that with mxTextTools 3, test_Fasta would still fail on indexing a file as
a simple database using Mindy.

With the patch I think we only have five unit test failures:

test_Fasta
test_GenBankFormat
test_KEGG
test_format_registry
test_geo


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