[Biopython-dev] [Bug 2374] New: Uppdated lcc code.

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Sep 26 00:50:09 EDT 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2374

           Summary: Uppdated lcc code.
           Product: Biopython
           Version: 1.43
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: sbassi at gmail.com


Here is a revised version of the lcc code.
changes:
1) clean up some code (removed global var, string module).
2) works for both lower and uppercase sequences.
3) both functions inside this module expect just the sequence to calculate the
lcc and not a sequence to be sliced. So now is up to the coder to pass the
string sliced.


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