[Biopython-dev] [Bug 2366] New: Ambiguous nucleotides in (Reverse)complement functions in Bio.Seq

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2366

           Summary: Ambiguous nucleotides in (Reverse)complement functions
                    in Bio.Seq
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: All
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: biopython-bugzilla at maubp.freeserve.co.uk


Currently the (Reverse)complementfunctions/methods in Bio.Seq do NOT support
ambiguous nucleotides.

For example, the complement of H={ACU} should be D={UGA}

I'll upload a patch to Bio/Seq.py and its unit test in a moment... bugzilla
doesn't let you do this as part of filing a bug.


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