[Biopython-dev] [Bug 2363] New: Bio.Pathway files not stored as plain text in CVS?

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2363

           Summary: Bio.Pathway files not stored as plain text in CVS?
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Windows XP
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: biopython-bugzilla at maubp.freeserve.co.uk


I've just checked out a fresh clean copy of Biopython from CVS, and built it
from source on Windows XP with Python 2.3 and MSCV 6.0 as the compiler.

test_pathway.py and test_KEGG.py both failed (complaining about syntax errors
on import statements which looked fine).

This can be fixed by editing the files Bio/Pathway/__init__.py and
Bio/Pathway/Rep/*.py to use Windows/DOS/PC line endings (odd!)

I suspect that the Bio.Pathway python files have been checked into CVS as
binary files rather than as plain text.


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