[Biopython-dev] Biopython status

bartek wilczynski bartek at rezolwenta.eu.org
Tue Oct 16 09:11:01 UTC 2007


Michiel De Hoon <mdehoon at c2b2.columbia.edu> wrote:

> > First, how might I put these changes up for review in order  
> > to contribute back to the code base? The main changes have been to  
> > the AlignAce parser, since as it was it just ignored information  
> > contained in the alignace file regarding the motif instances (namely  
> > which input sequence they came from, where they started in the  
> > sequence, and what strand they were on).
> 
> In this case, it is a good idea to contact the current maintainer of
> Bio.AlignAce, either via the mailing list or directly. From the Biopython
> CVS, it seems that Bartek is currently the main maintainer of Bio.AlignAce,
> so it would be a good idea to discuss with him.

I'm not dying either ;).  I'm the author of the Bio.AlignAce module and if you
have any new code to contribute to it, I'll be glad to help you. The best way
to do it would be to submit an enhancement bug report in bugzilla. If the
changes are smaller, you can just send them (as a diff) to the list and I'll
try to fit them to the current cvs version of Bio.AlignAce

Bartek Wilczynski



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