[Biopython-dev] [Bug 2361] Test Suite Failures from Martel/Sax with egenix mxTextTools 3.0

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Oct 4 02:10:13 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2361





------- Comment #30 from mdehoon at ims.u-tokyo.ac.jp  2007-10-03 22:10 EST -------
Looking at the patch for Bio.FormatIO:
-------------------------
#Would like to have just issued a deprecation warning, and removed this
#module later.  However, due to the FormatIO code in Bio/SeqRecord.py the
#deprecation warning would be triggered whenever someone used the SeqRecord.

raise ImportError, "Bio.FormatIO has been removed.  Please try Bio.SeqIO
instead"
-------------------------

Since the patch for Bio/SeqRecord.py removes its dependence on Bio.FormatIO, is
it still necessary to raise an ImportError instead of issuing a
DeprecationWarning?


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