[Biopython-dev] [Bug 2382] Generic FASTA parser

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2382





------- Comment #6 from jflatow at northwestern.edu  2007-10-16 18:09 EST -------
The reference/consensus one was inspired by yet another format they have: there
are 2 tools they provide, one for mapping to an existing sequence, the other
for ab initio contig building. The mapping one has the extra reference column.

As you can see it might be hard to keep up with all these similar formats as
part of Biopython (these are only from one source). Certainly the common ones
should have wrappers but we should also be able to easily get the stream of
records.


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