[Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Nov 8 11:36:26 EST 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2390





------- Comment #13 from biopython-bugzilla at maubp.freeserve.co.uk  2007-11-08 11:36 EST -------
Issue One
---------
Missing %s in BioSQL/Loader.py approx line 240.  Fixed in CVS, BioSQL/Loader.py
revision 1.19

Issue Two
---------
The cursor problem.  I've checked in the suggested fix from my comment 7, Eric
Gibert suggested the same thing on the mailing list.

Eric's email suggests we also have to do something about finishing the SQL
transaction - i.e. actually doing a commit to save the inserted records in the
databse.


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