[Biopython-dev] [Bug 2251] [PATCH] NumPy support for BioPython

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2251





------- Comment #2 from mdehoon at ims.u-tokyo.ac.jp  2007-03-28 12:09 EST -------
It looks like there's an error in this patch:

@@ -166,7 +184,7 @@
     const int colstride =  (*array)->strides[1];
     for (i=0; i < nrows; i++)
     { const char* p = p0;
-      mask[i] = malloc(ncolumns*sizeof(int));
+      mask[i] = malloc(ncolumns*sizeof(int*));
       for (j=0; j < ncolumns; j++, p+=colstride) mask[i][j] = *((int*)p);
       p0 += rowstride;
     }

mask is int**, mask[i] is int*, and we're allocating ncolumns integers.
Or am I missing something?


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