[Biopython-dev] PATCH: NumPy support for BioPython

[Michiel Jan Laurens de Hoon]

Ed Schofield wrote:
> Ah, yes, I understand. And I've now re-read your previous post and now 
> understand your point there about clustermodule.c too. So I've changed 
> all (flags & CONTIGUOUS) instances to use PyArray_ISCONTIGUOUS() in my 
> patch and updated it at
> 
> http://edschofield.com/biopython-numpy-support.patch 

OK, thanks. I have fixed clustermodule.c in Biopython's CVS to use 
PyArray_ISCONTIGUOUS instead of (flags & CONTIGUOUS).
I'll look at this patch in more detail after the upcoming release is out.

--Michiel.

-- 
Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1130 St Nicholas Avenue
New York, NY 10032