[Biopython-dev] [Bug 1816] Error when importing GenBank file into BioSQL database

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Mar 14 14:27:07 UTC 2007


mcolosimo at mitre.org changed:

           What    |Removed                     |Added
             Status|NEW                         |ASSIGNED

------- Comment #5 from mcolosimo at mitre.org  2007-03-14 10:27 EST -------
I've attached two diffs that fixed a bunch of "bugs". A bug was introduced that
broke a key feature (storing of ncbi taxon ids) when trying to fix a bug. I
fixed both the code that looked up the ncbi taxon ids and the sql statement
that stored them. 

Hint: using None is better than "0" or removing it. 

Also, using my code and the latest BioSQL schema, I was able to load in
AY243312 with out any problem.

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