[Biopython-dev] [Bug 2090] Blast.NCBIStandalone BlastParser fails with blastall 2.2.14

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2090





------- Comment #14 from biopython-bugzilla at maubp.freeserve.co.uk  2007-06-13 06:18 EST -------
I've updated CVS with an improved version of my patch (attachment 520) which
also copes with Italo Maia's two BLASTX 2.2.15 plain text output files.

I'd welcome a few more (small) examples to add to Biopython as test cases (I'll
ask Italo Maia on the mailing list if we can include his two files).

Note that this only solves some of the issues with plain-text parsing.  It
still won't read recent multi-query plain text output (as the header is not
repeated).


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