[Biopython-dev] [Bug 2051] XML Blast parser unusable with multiple queries and recent (2.2.13) blast - patch attached

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Jan 3 21:38:39 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2051





------- Comment #13 from mdehoon at ims.u-tokyo.ac.jp  2007-01-03 16:38 -------
> Regardless, I do still see a
> number of inconsistencies.

Please submit a separate bug report (including your patch) for these
inconsistencies. The current bug report is titled

"XML Blast parser unusable with multiple queries and recent (2.2.13) blast -
patch attached"

With Peter's patch, we can now parse multiple blast queries, so I'd like to
close this bug report.

For future bug reports and patches:
Try to handle separate bugs in separate bug reports and patches. For
developers, when looking at a patch handling several issues at the same time,
it's difficult to understand which parts of the patch are essential, which are
good but non-essential, and which are code cleanup. Speaking for myself, I
would probably have considered this patch earlier if it had been less
convoluted.


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