[Biopython-dev] [Bug 2284] Bio.GFF.easy uses Bio.SeqIO.FASTA which is now deprecated

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sun Apr 29 19:49:44 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2284


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
         AssignedTo|biopython-dev at biopython.org |biopython-
                   |                            |bugzilla at maubp.freeserve.co.
                   |                            |uk
             Status|NEW                         |ASSIGNED




------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2007-04-29 15:49 EST -------
Created an attachment (id=642)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=642&action=view)
Patch to Bio/GFF/easy.py

Updates fasta utility functions to use Bio.SeqIO instead of Bio.SeqIO.FASTA
Removes classes TempFastaWriter and TempFastaWriterSingle


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