[Biopython-dev] Unigene flat file parser

Michiel Jan Laurens de Hoon mdehoon at c2b2.columbia.edu
Thu Oct 26 18:01:24 UTC 2006


Sean Davis wrote:
> I have put together a parser for the Unigene flat file format described here:

Perhaps a silly question from a non-Unigene user, but what is the 
relation between your parser and the one in Bio/UniGene/__init__.py? The 
latter seems to parse HTML files (see the example in 
Tests/test_unigene.py) instead of flat files. Is your parser intended as 
a replacement for Bio/UniGene/__init__.py?

--Michiel.

-- 
Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1130 St Nicholas Avenue
New York, NY 10032



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