[Biopython-dev] [Bug 1972] New: New Prosite comment qualifier breaks Bio.Prosite.RecordParser

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Mar 21 07:07:57 UTC 2006


http://bugzilla.open-bio.org/show_bug.cgi?id=1972

           Summary: New Prosite comment qualifier breaks
                    Bio.Prosite.RecordParser
           Product: Biopython
           Version: Not Applicable
          Platform: All
        OS/Version: All
            Status: NEW
          Severity: minor
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: bill at barnard-engineering.com


To reproduce:

import Bio.Prosite
prosite = Bio.Prosite.ExPASyDictionary(parser=Bio.Prosite.RecordParser())
entry = prosite['PS00079']

which raises:

SyntaxError: Unknown qual '/VERSION' in comment line
CC   /VERSION=1;




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