[Biopython-dev] Clustal unit test

[Michiel Jan Laurens de Hoon]

Peter wrote:
> A minor point first of all, adding something like the following to the 
> end of test_Cluster.py makes it easy to run this unit test on its own:
> 
> if __name__ == "__main__" :
>      run_tests(module = "Bio.Cluster")

OK I've added this in CVS.

> Secondly, the test works for me with BioPython 1.41, but using today's' 
> CVS the test fails (or at least, sits there at high CPU usage for so 
> long I give up and kill it).  This was using Linux.
> 
I did make an update to Bio.Cluster but in my brilliance forgot to 
update the test scripts accordingly. CVS now contains updated 
test_Cluster.py and output/test_Cluster. Let me know if the test still 
fails with these updated files. Thanks for catching this.

--Michiel.

-- 
Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1130 St Nicholas Avenue
New York, NY 10032