[Biopython-dev] [Bug 2090] Blast.NCBIStandalone BlastParser fails with blastall 2.2.14

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Dec 4 17:01:51 UTC 2006


kael.fischer at gmail.com changed:

           What    |Removed                     |Added
                 CC|                            |kael.fischer at gmail.com

------- Comment #4 from kael.fischer at gmail.com  2006-12-04 12:01 -------
I am running some tests with the XML parser and will submit the problems I am
observing as separate bugs.  But there is at least one fundamental difference
between the parsers from the user's perspective (untested  on blastall versions
< 2.2.14):

BlastParser: 1 Blast Record instance = 1 query sequence
XMLParser: 1 Blast Record instance = many query sequences

But this bug report is about the "BlastParser"  I'll submit the XMLParser bugs

Is the BlastParser deprecated?  That is the impression I am getting.

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