[Biopython-dev] [Bug 1715] Bio.Blast.NCBIStandalone does not support standalone NCBI RPS-Blast (rpsblast) output

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1715





------- Comment #11 from biopython-bugzilla at maubp.freeserve.co.uk  2005-10-18 11:53 -------
I have just had another look at this code of mine...

It turns out that the plain text output from RPS-BLAST 2.2.12 is slightly
different to that from 2.2.10 which I was using.

I'm wondering about supporting the RPS-BLAST XML output instead, as Michiel de
Hoon has indicated a preference to move to this in the future...

http://www.biopython.org/pipermail/biopython-dev/2005-October/002130.html




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