[Biopython-dev] [Bug 1709] Not using -fPIC to build shared lib.

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1709

mdehoon at ims.u-tokyo.ac.jp changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED



------- Additional Comments From mdehoon at ims.u-tokyo.ac.jp  2005-02-14 04:19 -------
The fix for setup.py is not suitable because it is platform-dependent and most
likely will cause problems on other platforms. Currently, the only C++ dependent
module in Biopython is Bio.KDTree, whose compilation is switched off on default,
since not many users need this module. The C++ code in Bio.Affy has been
replaced by pure Python code. So with the current Biopython, this bug should not
appear. Note that Python 2.4 has better C++ support than Python 2.3 (which
generated the traceback below), so this may be less of a problem if future
Biopython extensions contain C++. Closing this bug for now.

1. The .dtd file permissions seem to have been fixed.
2. I'm not sure what to do about these. Perhaps a local problem?
3. This seems to be a distutils problem rather than a Biopython problem.



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