[Biopython-dev] [Bug 1773] Martel.Parser.ParserPositionException

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1773


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
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             Status|NEW                         |RESOLVED
         Resolution|                            |DUPLICATE




------- Comment #2 from biopython-bugzilla at maubp.freeserve.co.uk  2005-12-24 07:28 -------
Having investigated bug 1680 further, I'm sure that your issue with the
trailing blank lines is the same problem, so I'm marking this as a duplicate.

However, as far as I can tell, your example GenBank file only has one "genbank
record" in it (i.e. it only has one LOCUS line).

*This means that indexing this particular file is rather pointless*

Indexing the features within this single GenBank record might be more useful,
there is an in-memory approach to this here:

http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/python/genbank/#indexing_features

*** This bug has been marked as a duplicate of 1680 ***




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