[Biopython-dev] incomplete patch to parse Genbank-TPA record
BK000008
Jeffrey Chang
jchang at jeffchang.com
Mon Sep 22 14:01:18 EDT 2003
On Monday, September 15, 2003, at 05:49 AM, Peter Bienstman wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> On Monday 15 September 2003 13:06, Andreas Kuntzagk wrote:
>> Since I'm stuck with this, I'm giving you the incomplete patch in
>> hope,
>> somebody will have time to look at it. At the moment it parses the
>> BK000008 and BK000018 entries in GenBank and hopefully others as well.
>>
>> BUT: the information is put into the Record only in form of one long
>> string with newlines deleted. If anybody really neads this info, it
>> should be stored in a better way.
>
> Thanks for looking into this!
>
> My personal view is that it's better to have a patch that parses the
> records
> (even though it lumps the info), rather than no patch at all.
>
> Jeff, what do you think, can we commit this?
Yes, I agree. I've patched it, and will commit it to CVS shortly.
Thanks for the patch, Andreas, and Peter for checking it over.
Jeff
More information about the Biopython-dev
mailing list