[Biopython-dev] [Bug 1437] New: Parse Error in NCBIStandalone.py

bugzilla-daemon at cvs.open-bio.org bugzilla-daemon at cvs.open-bio.org
Tue Apr 29 15:24:58 EDT 2003


           Summary: Parse Error in NCBIStandalone.py
           Product: Biopython
           Version: 1.10
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: gckettle at cs.uchicago.edu

The blast parser will return an inaccurate query length if it is long enough to
include a comma.

It looks like _HeaderConsumer.query_info() should be using something like
r"([0-9,]+) letters"
r"(\d+) letters"

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