[Biopython-dev] localblast bug?

Brad Chapman chapmanb at arches.uga.edu
Wed Sep 5 17:27:45 EDT 2001

Hi Chunlei;

>    I wrote a script for localblast. It always raised a
> TypeError:
>    When I modified line 1447 as:
>    r, w, e = popen2.popen3(' '.join([blastcmd] +
> params))
>    then it works.

Thanks for the fix. I think you're probably the first to use the
localblast module on windows, so you get to run into the platform
specific problems (aren't you lucky :-). Your fix works fine for me
on UNIX as well (with the Doc/examples/local_blast.py script), so I
checked your change into CVS. It is available from anonymous CVS and
should be in the next release.

Thanks again!

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