[Biopython-dev] Notification: incoming/51

biopython-bugs at bioperl.org biopython-bugs at bioperl.org
Thu Oct 25 15:22:41 EDT 2001

JitterBug notification

chapmanb moved PR#51 from incoming to fixed-bugs
Message summary for PR#51
	From: crm17 at cornell.edu
	Subject: biopython-1.00a3/Bio/__init__.py error
	Date: Thu, 25 Oct 2001 09:36:27 -0400
	0 replies 	0 followups
	Notes: Thanks for pointing this out. Fixed in CVS (my easiest fix ever :-)


>From crm17 at cornell.edu Thu Oct 25 09:36:27 2001
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Date: Thu, 25 Oct 2001 09:36:27 -0400
Message-Id: <200110251336.f9PDaRB30894 at pw600a.bioperl.org>
From: crm17 at cornell.edu
To: biopython-bugs at bioperl.org
Subject: biopython-1.00a3/Bio/__init__.py error

Full_Name: Chris Myers
Module: biopython-1.00a3/Bio/__init__.py
Version: biopython-1.00a3
OS: Linux
Submission from: sowhat.tc.cornell.edu (

the __all__ definition in 
biopython-1.00a3/Bio/__init__.py is missing a
comma between "Alphabet" and "Blast"

__all__ = [
# ...

The result is that 

from Bio import *

chokes, claiming:

  AttributeError: 'Bio' module has no 
  attribute 'AlphabetBlast'

Adding the missing comma fixes this.

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