[Biopython-dev] Re: [Biojava-l] Re: [BioXML-dev] Uniform parsing vocabulary

[Bradley Marshall]

Actually, I just looked around for this type of
ontology last week and found nothing.  I think it
would be a valuable tool.

Brad

--- Matthew Pocock <mrp at sanger.ac.uk> wrote:
> Propose away - do we have ontologies for these
> things knocking about yet?
> 
> Cox, Greg wrote:
> 
> > I apologize for the cross-posting.
> > 
> > I'm involved in the BioJava project, and I'm
> looking at constructing a
> > uniform vocabulary for the parsed keys.  For
> example, currently in BioJava,
> > if an EMBL record is parsed the Organism
> information goes under the key
> > 'OS', while if a Genbank record is parsed, the
> information is under the key
> > "ORGANISM".  Are there existing standards that
> define the keys used, or
> > should I put together a new proposal?
> > 
> > Greg Cox
> > _______________________________________________
> > BioXML-dev mailing list  -  BioXML-dev at bioxml.org
> > http://bioxml.org/mailman/listinfo/bioxml-dev
> 
> 
> _______________________________________________
> Biojava-l mailing list  -  Biojava-l at biojava.org
> http://biojava.org/mailman/listinfo/biojava-l


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