[Biopython-dev] New BLAST web page

Jeffrey Chang jchang at SMI.Stanford.EDU
Tue Mar 20 12:15:36 EST 2001

Everything seems to have cleared up now.  I've committed the patch, and
blast now works against the NCBI web site again.  Thanks for the work,


On Sun, 18 Mar 2001, Brad Chapman wrote:

> Hi Jeff;
> > Thanks for these fixes.  I've applied the patches and am trying to search
> > for sequences against the NCBI web site.  Unfortunately, I seem to be only
> > getting a piece of the results back!  The output cuts off suddenly in the
> > alignments section.
> [...snip...]
> > However, the web version seems to be doing the same thing, so it's very
> > likely not your patches.  Are you seeing the same thing?
> Hmmm, I'm not seeing this... The entire thing seems to come through
> for me. I'm using the Doc/examples/www_blast.py script to do the
> testing on this, if that is any help to you. NCBI was timing out
> a few times for me today, so I guess things might be flakey over
> there. I'll blame it on all of the web sysadmins being up too late 
> last night drinking green beer :-)
> > I'm going to wait and see if this clears up over the next few days, before
> > I commit the patch.
> Let me know if it doesn't get any better for you. It is no problem to
> wait on the patch -- I'd much rather be sure it is working right!
> Thanks for looking at it. 
> Talk to you soon.
> Brad
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